Grassmannian  Estimation, with Claude Auderset and Ernst Ruh

Stochastic models and numerical algorithms for a class of regulatory gene networks, with Thomas Fournier, Jean-Pierre Gabriel, José Galbete, Jérôme Pasquier and Nicolas Mermod, to appear in Bulletin of Mathematical biology

Plantes, spirales et nombre: les plantes font-elles des maths?, with Chrystel Feller and Florence Yerly. Bulletin de la Société Fribourgeoise des Sciences Naturelles (99)(2010)

Phenotypic diversity and population growth in fluctuating environments: a MBPRE approach, with Clément Dombry and Vincent Bansay. To appear in the Journal of Applied Probability (2011).

Modelling Food Webs: Exploring Unexplained Structure Using Latent Traits. R. Rohr, H.Scherer, P. Kehrli, C. Mazza and L-F. Bersier. The American Naturalist,  2010, 176 (2): 170-177

As the world turns: Short-term human spatial memory in egocentric and allocentric coordinates. To appear in Behavioural Brain Research, 2011.

Nuclear factor I revealed as family of promoter binding transcription activators. BMC Genomics 2011. 12:181

High-level transgene expression by homologous recombination-mediated gene transfer. Nucl. Acids. Res. (2011)

Pattern formation in auxin flux. J. Math. Biol. (2014). 68:879--909

Matching-centrality decomposition and the forecasting of new links in networks. Arxiv: 1310.4633 (2013). Proc. R. Soc. B 283. 2016

Fast change detection on proportional two-population hazard rates. N. El Karoui, S. Loisel, Y. Salhi and C. Mazza. Working paper (2013)

Self-Organization of Plant Vascular Systems: Claims and Counter-Claims about the Flux-Based Auxin Transport Model. PLOS ONE (2015).

Ultrasensitivity and sharp threshold theorems for multisite systems. ArXiv 2015. J. Phys. A: Mathematical and Theoretical (2017). 

The Effect of Gap Junctional Coupling on the Spatiotemporal Patterns of Ca2+ Signals and the Harmonization of Ca2+-Related Cellular Responses. PLOS Computational Biology (2016)

Quantitative chemical biosensing by bacterial chemotaxis in microfluidic chips. Environmental Microbiology (2017)

Statistical  Approaches for Inferring and Predicting Food-Web Architectures. Cambridge University Press (2017)

The feasibility of equilibria in large ecosystems: a primary but neglected concept in the complexity-stability debate. PLOS Computational Biology (2018)

Mathematical modelling of navigational decisions based on intensity versus directionality in Drosophila larval phototaxis. BioRXiv (2018). Scientific Reports 8 (2018)

Mean field repulsive Kuramoto models: Phase locking and spatial signs. ArXiv (2018)

Stationary Distributions and Condensation in Autocatalytic CRN . ArXiv (2018). SIAM J. Appl. Math. (2019)

Geometrical and statistical properties of M-estimates of scatter on Grassmann manifolds. ArXiv (2019)

Extending  the Mathematical Palette for Developmental Pattern Formation: Piebaldism. Bulletin of Mathematical Biology (2019)
 
An analog to digital converter controls bistable transfer competence development  of a widespread bacterial integrative and conjugative element. eLife(2020)

Consistency and asymptotic normality of M-estimates of scatter on Grassmann manifolds. JMVA March (2022)

Regulated bacterial interaction networks: A mathematical framework to describe competitive growth under inclusion of metabolite cross-feeding. BioRXiv. Plos Computational Biology (2023).